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DNA Encoded Library (DEL) Screening Services DNA Encoded Library (DEL) Screening Services

DNA Encoded Library (DEL) Screening Services

in partnership with

Aurigene offers DEL screening services for small molecules in collaboration with Vipergen. The platform adds additional flexibility to our core Integrated Drug Discovery (IDD) solution.

Overview of DEL Screening services

Aurigene offers state-of-the-art DNA Encoded Library (DEL) screening services for small molecules, in strategic collaboration with Vipergen, to accelerate innovation in drug discovery by increasing success rates and reducing timelines through screening a billion+ small-molecule compounds.

The unique platform enables screening not only using a purified drug target protein but also in a living cell. Screening in a living cell mimics the physiological conditions more accurately.

The collaboration aims to co-market and offer DEL screening technologies to global customers as a standalone service or as an integrated drug discovery service. Combining Vipergen’s DEL technology with Aurigene’s 20+ years of experience in synthesis, protein generation, assay development, and testing of compounds in both in-vitro & in-vivo setup enables us to service the customer end-to-end.

Screening in a living cell (DEL in cell)

Leverages Cellular Binder Trap Enrichment®(cBTE) technology. It is the first and only technology for screening of DELs inside a living cell.

The advantage of screening inside a cell includes:

  • Screening under physiologically relevant conditions
  • Lower attrition rate
  • No need for highly purified target protein
  • Broader protein target space

Screening on purified protein

uses homogeneous screening method, Binder Trap Enrichment® (BTE), water-in-oil emulsion technology to isolate individual ligand-target complexes

The specific benefits of BTE include:

  • High fidelity – low false positive rate
  • Generally applicable across disease areas and target classes
  • Applicable to difficult targets (including PPIs and protein complexes)
  • Target-ligand residence time based discovery (unique capability)
  • Affinity based discovery
  • Instant SAR
  • Instant selectivity – multiplexed screening of target and anti-targets (unique capability)
  • Low amounts of protein required (μg)

Yoctoreactor libraries

The Yoctoreactor libraries containing hundreds of millions of DNA-encoded drug-like small molecules are synthesized in a single tube-format by drawing on the self-assembly of complementary DNA into DNA junctions. Chemical building blocks (BBs) are brought into close proximity which facilitates chemical reaction and the attached DNA ultimately encodes the final product.

The overall design has favorable implications for the scope and reliability of the chemistry, the stability of the structure, and, ultimately, the capability for addressing the most challenging targets. 100% correspondence between code and synthesized compound is ensured by purification steps using the DNA as purification handle after each chemical step. Learn more

Homogenous assay ability to multiplex

A homogeneous screening method for DELs which uses water-in-oil emulsion technology to isolate individual ligand-target complexes. Ligands to a protein target are identified by trapping binding pairs (DNA-labelled protein target and DEL ligand) in emulsion droplets during dissociation dominated kinetics. Once trapped, the target and ligand DNA are joined by ligation, thus preserving the binding information.

What next after screening?

  • Resynthesis of compounds (without DNA tag), confirmation of hits in orthogonal assay
  • Optimize the hits using CADD, AIDD and traditional approaches
  • Lead optimization and candidate nomination

The identified potential hits from the screening will be dedicated to the customer and removed from the library for other customers.

For more detailed information about our DEL screening services, visit Vipergen's page on DEL technology.

Why Aurigene Pharmaceutical Services?

In cell screening: Physiological relevant screening conditions

High success rate: ~80% for even difficult targets

Low false positive rate: high fidelity process

Integrated drug discovery capabilities: Aurigene’s IDD and commercial offerings enable one-stop solution

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